Pedigrees


Captions are on! Turn off by clicking CC at bottom right. Follow the amoebas on Twitter (@AmoebaSisters) and Facebook! So I have a really awesome picture for you. This. Oh it may look like circles and squares to
you, but make no mistake, this is no ordinary picture. This…is a pedigree. A pedigree is like a family tree- it can show
information about an inherited trait passed across generations. And this one is actually a small pedigree
of us! Well, our human forms. That’s me. My sister. My mom. My dad. I’m not arbitrarily picking random shapes
to represent us either. In a pedigree, the circles represent females. Squares represent males. One way you can remember that is that the
letter “C” (for circle) comes before the letter “S” (for square) in the alphabet. Alphabetically, the letter “F” (for female)
comes before the letter “M” (for male). I’ve got a thing about letters of the alphabet
though- I realize that may not work for everyone. These roman numerals represent generations—there’s
2 generations here. This between my parents is called a marriage
line. This line here connects parents to children
so you can see there are two children from this marriage. Now you may wonder, why are some of these
shapes shaded? What does that mean? Well the shaded shapes represent a trait that
is being tracked in the pedigree. Here are 2 important facts about the particular
trait I chose to track. Fact #1 about this trait being tracked is
that it’s recessive. Recall that in typical Mendelian inheritance,
dominant alleles—if present—will express dominant traits. Recessive alleles only are expressed when
the dominant allele is not around. Fact #2 about this trait is that it is an
autosomal recessive trait. Just a reminder that autosomal means a chromosome
that is not a sex chromosome. In human body cells, there are 46 chromosomes. The first 44 (22 pairs) are autosomes. The last 2 (1 pair) are sex chromosomes. So this trait is not sex-linked since it is
autosomal and that means it does not need to be written as coefficients on the sex chromosomes. So what is the trait we’re tracking? Attached earlobes! Yes, you may not realize it, but look around
and you will see that humans with free or attached earlobes. Although we want to point out that there may
be more than just these two categories for ear lobes, and while this example is used
often in basic genetics, there’s probably more to this than one simple gene. For our example, let’s assume a one gene
trait and that free earlobes is dominant, meaning at least one dominant allele must
be around. Attached earlobes is recessive, showing when
no dominant allele is present. So if we were to put the genotypes next to
each of these shapes, what would they be? Well the shaded ones would be easy. Because we just mentioned this attached earlobes
trait we’re tracking is an autosomal recessive trait. If we use the letter “e” then these shaded
shapes must be lowercase e, lowercase e. Any capital (dominant) letter—and the individual
would have free earlobes and not be shaded. So let’s look at individual #2 in the first
generation. That’s our father. He’s not shaded so he can’t be little
e little e. What about big E, big E? Well there’s a problem. See his children? Us, ha. Each child must get an allele from EACH parent. So if I received a little “e” from my
mom, then I have to get my other “e” from my dad. Therefore he can’t be big E big E or he’d
have no little “e” to give! His genotype must be the heterozygous genotype,
Ee. He’s what we call a carrier though he still
has a phenotype of free earlobes because of that one capital. Now that’s just one tiny pedigree. Let’s look at a big family reunion! Um, an imaginary one, because I have to confess
I don’t really know whether our relatives have free or attached earlobes. I thought about sending survey out to all
of them, but…it felt a little awkward. So here we go, big giant imaginary family
of relatives! Ok so just to make sure you understand this—how
many siblings does my dad have? Well look, here’s my dad in generation 2
(#4). He has three siblings, all brothers, right
here. What is the phenotype of my paternal grandfather? Well look, here’s my dad. Here is my dad’s dad—that would be my
grandfather. Because his square is shaded—that means
his phenotype is attached earlobes. So let’s go ahead and label all these shaded
shapes with the genotype little e little e since we know that’s the trait we’re tracking. Now take a look at generation 1, individual
1. That would be my paternal grandmother. What’s her genotype? We know it’s not little e little e or her
shape would be shaded. But if we went with EE could that work? Yes, all the offspring could get a big E from
her and a little e from my grandfather. But what about Ee—would that work too? Yes! Because the children could still get a big
E from her and a little e from the grandfather. It may be less of a probability but it’s
possible and therefore—we must list both that she is EE OR Ee. We don’t know. All the offspring of my paternal grandparents
though are going to have to be Ee. Remember they have to get an allele from each
parent…and that means they are going to pick of that little “e” from my grandfather. They will be heterozygotes and that’s the
only option here. Pause this video and try to solve the right
side of this pedigree now! Imaginary family done! So how’d you do? Here’s some of the tricky ones. Did you see that generation 1, individual
4 has to be a carrier only (Ee)? If not, then the shaded individual children
would not be able to get the “ee” that that they have…because they have to get
a little “e” from both parents. How about individual 9? This female married in, but that’s not the
reason she can be either EE or Ee. If you look at the children, they aren’t
shaded. So while they will have to get a little “e”
from number 8 as that’s all #8 can give…the other capital letter can be obtained from
#9 regardless of whether she’s EE or Ee. Remember, one option may be more likely, but
if it’s possible, you must include both. Now remember we had made a big deal about
how this was autosomal. What if you are dealing with a sex-linked
trait and therefore a sex-linked pedigree? There are a lot of sex-linked recessive traits. Color-blindness and some male patterns of
baldness can be sex-linked. Let’s pretend that now, we are told this
is a sex-linked recessive trait. I’m going to keep the old labeled pedigree
here that showed an autosomal recessive trait just for comparison, but now here is a brand
new sex-linked pedigree. First of all, all the females (circles) should
have an XX to indicate two X sex chromosomes by them. Remember females have two X chromosomes. Males should have an XY to indicate a X and
Y sex chromosome. It’s always a good idea to do that first. Now remember that we were told this pedigree
is tracking sex-linked recessive traits. So the shaded one here has the sex-linked
recessive trait. A reminder from our sex-linked video about
how this works. Let’s use the letter R for an allele and that’s what we’re going to use for the shaded shape right now. Now recall females that do not have the trait
can be either this or this. And the heterozygote genotype (this) is a carrier. She doesn’t have the trait herself because
of the dominant allele but she’s carrying it. Only a female that is this will have the sex-linked
recessive trait. So if I’m looking at this pedigree, what
would the genotype for individual 1 in generation 1 be? Well notice here she has 3 children and one
of her sons here is shaded. Where does her son get his Y sex chromosome
from? The father. Where does he get his X sex chromosome from? His mother! Individual 1 doesn’t have the trait or she
would be shaded, but she must be a carrier if her son received a X chromosome with a
recessive allele on it. What about individual 2 in generation 2? Well she can be this like her mother. But look, she could also be this because it’s
possible to get one of those from each parent. If it’s possible, you must include it. Now pause the video and try the last female. How’d you do? Remember the key here is to always check and
make sure that when you look at a child—they have to be able to get one of their alleles
from EACH parent. Now remember that both of these examples were
recessive. It doesn’t have to be that way. On our handout, you can try one out that follows
an autosomal dominant trait. If it’s a dominant allele that you are tracking,
remember it would only take ONE dominant allele for a person to have the trait. Another quick thing to point is sometimes
you will see pedigrees that are half shaded. Well that’s just awesome because they are
basically letting you know that the half-shaded ones are carriers. If I wanted to turn our first one into one
that shows half-shading, then it would look like this. Mapping and understanding pedigrees is important,
especially as we continue to make advancements in understanding how genetic disorders are
inherited. Well that’s it for the Amoeba Sisters and
we remind you to stay curious!

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